Saturday, 9 July 2016

How to get involved at UBC?

Why you should get involved at UBC?

  • Make friends :) There are a lot of students, the easiest way to make friends is by getting involved where you all share at least one thing in common. 
  • Gain "leadership" experience. As cliche as this sounds, university is the best time to learn new skills especially things outside of your degree. All it takes is signing up or stepping up to the plate. You'll be surprised how much you can pick up from activities like running committees, organizing social events, writing newspaper articles, or working with kids. 
  • Try something new. Being a Science student doesn't mean you can't volunteer as a photographer for a newspaper, work as a stage manager for SLC (Student Leadership Conference), go on work trips with VOC (Varsity Outdoor Club) etc. There is nothing like good peer pressure to encourage you to try something you've always wanted to (skydiving, anyone?). 

How should I get involved?

  1. Establish your goal for getting involved. Is it to improve certain skills like public speaking, make friends, keep playing an instrument, try new things etc?
  2. What level of involvement do you want? For example, being the president of AMS is basically a full-time job while being a photographer for a club is much lower commitment.
  3. Where do you want to get involved? UBC has many different areas to get involved from student life, student politics, academic to community. I will attempt to list some from each area. Note: many of these areas overlap  
Student Life: 
  • Rez Life (become a floor rep, residence advisor etc)
  • Join AMS Clubs (from different hobby clubs, activist clubs to various culture clubs, there are tons of options to choose from) Shameless pitch for my old club: check out Shine On Music if you want to teach violin to elementary students. 
  • UBC Rec (work at the Bird Coop, organize intramurals & events) 
Student Politics:
  • Faculty constituencies/ student associations (ex. Science Undergraduate Society - SUS) There are multiple ways to get involved. From first year council, different committee positions to elected members (President, VP positions), there are tons of positions for interested students. 
  • AMS Again there are elected positions for President & VP positions, but there are also lots of committee positions. 
  • Senate/ Board of Governors These are elected positions only. 
Academic:
  • Volunteer or Paid Research Positions Check out UBC Careers Online or URO for more details, UBC's work-learn program is nice way to get paid (and learn something)
  • Department Student Clubs While most positions tend to be elected, there are opportunities to get involved without going through the election process
  • Teaching Assistant/ Peer Tutor Typically senior undergraduate students have the opportunity to TA classes they previously did well in. This is extremely common for students in computer science or math. 
Community:
  • Again some AMS Clubs focus on reaching out to the community
  • Volunteer teaching opportunities Lots of organizations need volunteers to teach & mentor elementary & high school students. Examples include Let's Talk Science, Science Fairs, and Aquarium. 
  • Want a year-long volunteer opportunity? UBC's Centre for Community Engaged Learning organizes the Trek Program which is a 6-month commitment. 
  • Want a short(er) volunteer opportunity? Check out UBC's Reading Week run by UBC's Centre for Community Engaged Learning. 
  • Have an amazing idea to help your community? Apply for UBC grants here
Events:

Got more ideas about how you can get involved? Comment below :) 

Thursday, 2 June 2016

Graduation Student Speaker

What is the graduation class speaker's role?

The primary role is to announce the graduating class gift(s) to the university during the ceremony. The AMS has already solicited ideas from the student body and so the gifts have already been decided. The designated speaker will be given the list to read. The second role is to speak briefly about your undergraduate experience and/or what graduation means to you.

How do I apply to be the graduation Student speaker?

Typically for the Faculty of Science, faculty will nominate names to the Science Associate Dean of Students (Dr. Paul Harrison for 2016). In mid-March, he will email potential students to submit a short 100 - 150 word draft speech if they are interested in the role. Dr. Harrison then proceeds to choose one speaker per ceremony (for Science, there are 4 speakers total).

Graduation Day for the Student Speaker

An hour / an hour and a half before the ceremony time, go downstairs to get your robe + hood. (Remember to pre-rent your robe online EARLY)

30 minutes before your designated ceremony time, head upstairs to the Theo Lounge and meet the Chancellor's Procession which includes UBC President, Chancellor, Faculty Dean & associate deans, Marshall etc. There is food and drinks in the lounge, so you can grab a bite to eat. The ceremony organizers will talk you through the entire procedure from when and where to sit, the order of the speakers etc. 

10 minutes before ceremony time, the Chancellor Procession will begin to walk towards the Chan Centre. All the other students have already entered the hall. The Procession enters from the back of the theatre and marches up to the stage, the Student Speaker sits in the first row, stage left (so wear nice shoes :P ). Remain standing until everyone is on stage and the Chancellor asks everyone to sit. After the President speaks, it is your turn. Question I still have: are you suppose to remove your cap for O Canada? 

The Student Speaker will have 3 minutes to sing, rap, talk however they like except they must include the pre-written graduating class gift blurb. Your speech must also be approved beforehand, typically around 300 words max. 

After the speech, the Student Speaker returns to their seat and waits until their procession number is lining up. Then the Marshall will direct you off stage to join your classmates. After walking across the stage rather than following your classmates back off stage, the Student Speaker walks around the back of the stage to their original seat on stage. 

During various parts of the ceremony, the Chancellor will ask graduating students to stand. Please follow their instructions despite being one of the only people standing on stage and it's super awkward. 

At the end of the ceremony, the Student Speaker will follow the Chancellor Procession out of the auditorium. Be sure to take pictures with people in the Procession before everyone else exits. :P 

Why you should apply to be Student Speaker?

It is definitely a once in a lifetime opportunity, and makes your graduation extremely memorable. Despite writing the speech being an extremely frustrating process of writing/ re-writing/ re re-writing, the adrenaline of speaking to a full auditorium is amazing. Another cool perk of being Student Speaker is meeting the Honourary Degree recipients afterwards at their reception. 

Saturday, 16 April 2016

Honours degree or not?

Honours degree or not?

The requirements for Honours differ by major, for official information please refer to the UBC Academic Calendar (http://www.calendar.ubc.ca/Vancouver/index.cfm?tree=12,215,410,404).

What is an Honours (MICB) degree? 
Essentially it is a way for the university to acknowledge your focus in your specialization and relatively good academic standing during your degree. The blue requirements are the same across Science Faculty, but the exact requirements vary slightly per department. 
  • Take at least 30 credits each year except for your last year and/or if you are on co-op
  • Maintain a minimum 68% overall average every year
  • Requires 132 credits to graduate compared to the 120 credits for Majors
  • Take additional courses required for Honours (for MICB, this includes additional MICB courses of your choice including one seminar + MICB 430 + MICB 449)
  • Complete a graduating Honours thesis (MICB 449). See http://microinquiry.blogspot.ca/2016/04/micb-448449.html for details.

What recognition do I get if I do a Major (or Honours), but get really high grades?
When you graduate, if you achieve 85.0% average of 30 credits (varies on major, but typically a select list of 3rd/ 4th year required courses) and graduate with good standing, your degree will include a "with Distinction" designation. 

What are the benefits / advantages of doing an Honours degree?
  • If you are planning on taking primarily courses in your department, you might as well get acknowledged for it.
  • The opportunity to do a self-directed research project is a great experience. I highly recommend people to consider doing either a thesis or a directed study for Majors. 
  • Some universities only allow those that graduate from Honours programs do direct-entry into a PhD program. However, some universities also allow students to enter a Master's program and transition into a PhD program after one year.
What are the challenges / disadvantages of doing an Honours degree?
  • You need to take more courses (which will make your entire degree cost more) and unless you plan it carefully (ie. take more than 30 credits a year) or have AP/IB credits beforehand, it might take you more than 4 years of course work. 
  • You MUST take a full course load every year except your last year. 30 credits per academic session (September - April) while is do-able, it is something to consider.
  • Less flexibility when choosing courses since there are more required courses. If you are considering a minor, this will make it more difficult so plan very carefully. 

MICB 401

MICB 401 (with Dr. Wade Bingle)
  • Course Taken: Tuesday 12:30-2pm lecture, Wednesday 1-5pm lab
  • Format: A typical lab course where you follow the directions in the lab manual. Make sure you have half an hour to go into the lab the day before and after your lab period to set up bacteria cultures/ wrap up an experiment (or have a really good friend). This course mainly puts what we learnt in MICB 201 into practice.
  • Grading Scheme: 20% hand-in various projects in lab (ie. slants, plates), 30% written assignments/ calculations, 35-40% final exam (during exam period), 10-15% lab performance
  • Textbook: MICB 401 Lab Manual (available in September, ~$20)
  • Class Average: 81%
  • Personal Experience: This is not a difficult course, but it does get confusing since you are juggling 4-5 different projects at the same time. The most difficult part is the final exam since you are expected to remember what you learnt in MICB 201 and apply it to the experiments we did. For example, for this type of media we used to grow bacteria, what could be the TEA/energy source/ C source etc. At the beginning of the course, you will also be asked to buy a lemon sole fish to cultivate luminous bacteria. The fish is relatively expensive ($15/fish), so it is advisable to buy the fish in groups 2-4. For the most part, the lab typically does not take 4 hours to finish. Most people tend to leave after 2 hours except for one lab day when you are extracting DNA via phenol chlorofoam. Compared to the other MICB labs, this is probably the easiest in terms of work load especially compared to MICB 447/421. 

Friday, 15 April 2016

MICB 448/449


MICB 448/449 (Directed Studies/ Honours Thesis)

Course Taken: September 2015 - April 2016
Class Average for MICB 449: 95% (Note: there were only 5 students taking the course)
Format: Self-directed project (10 - 15 hours per week) that takes place in your supervisor's lab for one or two terms. At the end of the project, you are expected to write a 10-15 page thesis and present on your project. There is no difference between Directed Studies and Honours Thesis except perhaps the length of the "course". 

Requirements


  • Contact eligible faculty members and discuss the possibilities of working in the lab of that faculty member. When there is a mutual agreement between the faculty member and the student then the student reports that agreement to the program coordinator and registers for the course
  • Submit a written outline of the proposed research project to the supervisor and the course coordinator.
  • Submit a written progress report to the supervisor and the course coordinator. 
  • Finish lab work and submit a research article that analyses the project and the results to the supervisor and the course coordinator. 
  • Defend the project and the report in a formal oral exam attended by the faculty supervisor and another faculty member.


Personal Experience/ Advice: If you want to work with a faculty member not in MICB, you will need to ask a MICB faculty member to be your co-supervisor. You may also need to justify how your project fits with microbiology & immunology. When choosing a project and a question, it is safer to choose an open-ended question rather than a "yes or no" question in case your project does not go as planned. A lot of students begin working in their prospective lab the summer before their official directed studies/ thesis starts to learn the techniques used in the lab, so that they can start their project right away in September. The biggest challenge with undertaking a self-directed project is staying motivated or at least motivated enough to optimize the assays required for your experiments. Remember to celebrate the small victories and ask other lab members for help!!

Grading Rubric





MICB 406

MICB 406 (with Dr. Francois Jean, Dr. Marc Horwitz)
  • Course Taken: T/Th 11-12:30pm (January 2016 - April 2016)
  • Format: Dr. Jean lectures half the term, then Dr. Horwitz lectures the end. The goal of this course is to write a paper about viruses in the style of PLoS Pathogens PEARLS (http://collections.plos.org/s/pearls) for each professor. For Dr. Jean, the theme was "emerging and re-emerging viruses" while Dr. Horwitz did not have a theme. Dr. Jean's section asks students to present their proposed topic, but Dr. Horwtiz will lecture on a general topic (ie. vaccines) and ask students in groups to prepare short 10 minute presentations on a specific aspect of that topic (ie. subunit vaccines).
  • Grading Scheme: Dr. Jean's section (5% abstract, 15% presentation, 5% participation, 25% paper), Dr. Horwitz's section (5% abstract, 5% outline, 25% paper, 15% participation)
  • Textbooknone
  • Class Average: 89%
  • Personal Experience: This course may seem a lot of work at the beginning as you narrow down a topic, but it gets easier once you establish 4-5 questions you will address in your paper. The difficulty of the course depends on how hard you want to try and what topic you choose to write about (ie. papers about HIV will typically be easier given the amount of literature already published compared to Zika virus in 2016). Overall, if you do not mind writing two papers (1500 words and 3000 words) over the course of the entire term, this course is quite relaxed. MICB 406 is primarily a course that encourages self-learning. If you are not interested in learning about viruses by reading papers, you should probably consider MICB 407 (term 1) which has more lectures and focuses on clinical implications of virus infections. 

Saturday, 30 January 2016

MICB 306

MICB 306 (with Dr. Danielle Krebs, Dr. Francois Jean)
  • Course Taken: MWF 12-1pm (September 2015 - December 2015)
  • Format: Dr. Krebs lectures half the term, then Dr. Jean lectures the end. Dr. Krebs' section primarily focuses on general life cycles of viruses using certain viruses as case studies. Dr. Jean talks specifically about three viruses (Hep C virus, Dengue virus, Ebola virus) and goes into depth about how they hijack the host and what treatments are available.  
  • Grading Scheme: 2 Midterms (20%, 25%), Final (45%), Online quizzes (10%)
  • TextbookVirology: Principles and Applications (J. Carter and V. Saunders), 2nd edition
  • Class Average: 81% 
  • Personal ExperienceA very straight forward course with a decent amount of memorization, but nothing outrageous. The weekly online quizzes are easy, and mainly try to keep the students caught up with the material. It is essentially an extension of what was covered in MICB 202. The midterms and final are also extremely fair. Great course if you are interested in viruses. While Dr. Krebs is not as strong lecturer as Dr. Kion, she is able to still communicate the material effectively. Dr. Jean is much more knowledgable about viruses; however, his notes are very difficult to follow. Most likely, you will need to make your own notes. This is a required pre-req for MICB 406/407 (virology seminar courses). 

MICB 430

MICB 430 (with Dr. Kronstad, Dr. Hallam, Dr. Jefferies)

  • Course Taken: Thursday 1:30 - 5pm (rarely went to 5pm)
  • Format: Each professor "taught" for 1/3 of the course. Students present every other week about an assigned primary literature article in partners. One student will present the paper while the second student will present the implications & critique the paper. Thus, each student will present twice for each professor--once as a reviewer, once as a critic.
  • Grading Scheme: Unsure, but I assume each professor's section is worth 1/3 of the grade. 
  • Textbook: none
  • Class Average: 92%
  • Personal Experience: This course may be a lot of work depending what papers you get assigned, and how comfortable you are at reading primary literature. Often the papers are out of your field, so you would need to read one review to understand the significance of the paper. If you want weekly journal club on various papers, and work on your presentation skills this course is for you. While it may be a bit of work every other week, the benefit is that there is no midterm or final and most students do extremely well in the course. The class size is about 10 students since typically only Honours students take the course. 
Answers to readers' questions: 
  • Can non-honours people take it? Yes, non-honours people often take it. My year we had 12 people in the course, and only 5 people were honours. Talk to Dr. Kion to register.
  • Do you recommend it for people not familiar with primary literature, can you become better at reading papers/ presentations? This is a great course to get better at reading papers since it just forces you to read way more than you would otherwise read. When I did the course, we had to present fortnightly; however, this may have changed since then. This course does not “teach” you how to read papers, but it does make you improve. You tend to present the papers with a partner, so you and your partner can bounce ideas/ struggle through the paper together. If you get really stuck, you can always go to the prof. They tend to be super helpful, and easily approachable. One thing to remember is when you present, only present the figures which depict the main point(s) of the paper and not every single figure.

Thursday, 28 January 2016

MICB 402 and MICB 412

MICB 402 (with Dr. Kenneth Harder, Dr. Georgia Perona-Wright)

  • Course Taken: T/Th 9:30am (September 2015 - December 2015)
  • Format: Dr. Harder teaches the first half, Dr. PW teaches the second half. Dr. Harder will mainly focus on innate immunity and ask you to read 6 primary literature papers on the topic (except for one cancer immunology paper)
  • Grading Scheme: Dr. Harder's Section (25% in-class midterm, 25% take home), Dr. PW's Section (35% take home, 25% final)
  • Textbook: none
  • Class Average: 76% 
  • Personal Experience: Given the class size is quite large, MICB 402 tries to disguise itself like a seminar course; however, at the end of the day, it remains a traditional lecturing course. Dr. Harder's section primarily focuses on experimental design & techniques. Although he suggests to pre-read the papers prior to class, he ends up going over each paper pretty slowly each class. Depending on how many questions people ask in class, he might run out of time before the midterm and you will be expected to read & understand the remaining papers. If you are comfortable reading primary literature, this course is not overly difficult. For Dr. Harder's midterm + take home, write FAST! Both tests are very long (not overly difficult but tedious), so plan accordingly. This year is Dr. PW's first & last year teaching MICB 402 (she accepted a position in Scotland), and previously it was Dr. Jefferies teaching the latter portion of the course. For Dr. PW, she typically used Tuesday to go over the background/ significance of the paper and Thursday to go over the experiments. Rather than focusing on experimental design, she emphasized immunological concepts & details. The papers she chose were focused primarily on the adaptive immune system especially Th2 response to helminth infections/ co-infections. Again, majority of her papers were not overly difficult but demonstrated key themes in advanced immunology. Her exam + take home was much more reasonable in terms of length and difficulty.
  • Note: Dr. Perona-Wright has accepted a faculty position back in Scotland and will not be teaching at UBC next year. :( 
Answers from readers' questions:

  • Was tutorial mandatory? What is tutorial like? Tutorial was not mandatory for us in the sense that attendance was not taken. I think we were highly encouraged to go, but most of us did not. Tutorial was going over methodology used in the papers we talked about in the course, and how to interpret data. However, I think the course may have changed since I took it with Dr. Harder & Dr. Perona-Wright in 2015/2016.


MICB 412 (with Dr. Pauline Johnson, Dr. Kenneth Harder)


  • Course Taken: T/Th 9:30am (January 2016 - April 2016)
  • Format: Dr. Johnson teaches the first half, Dr. Harder teaches the second half. Dr. Johnson focuses on the balance between our microbiota and maintaining homeostasis. Dr. Harder will mainly focus on cancer immunology. This course is a seminar-based course which means students are assigned a topic and are required to present ~15 minutes, 10 minutes questions on that topic. 
  • Grading Scheme: Dr. Johnson's Section (35% class presentation, 10% participation, 5% written report), Dr. Harder's Section (35% presentation, 10% participation, 5% written report)

  • Textbook: none
  • Class Average: 88%
  • Personal ExperienceThis course used to be 18 - 20 students; however, this year the course had around 25 students. Given the time constraints, students will present one 15 - 20 minutes presentation for each professor + 10 minutes of questions. Dr. Johnson prefers presentations that focus on content (based on reviews) while Dr. Harder prefers presentations that thoroughly explain one or two primary papers' methods + results. Besides presenting, you are expected to participate during the rest of the classes by asking questions. Finally, near the end of each half, you are expected to write a ~3 page summary of the topic, synthesizing all the talks. 
  • Advice: If you are uncomfortable with presenting, I highly suggest practicing beforehand to ensure your presentation falls within the time limit. In addition, if you are unsure what areas to focus on, you can ask the professor. 

Tuesday, 5 January 2016

MICB 447

MICB 447 (with Dr. Dave Oliver)

  • Course Taken: Tuesday 8am, Tuesday Lab (September 2015 - December 2015) You end up going into the lab regardless of lab day though.
  • Format: Working in groups of 3/4 for the entire term where you design and carry out an original research project. There are weekly lecture and team meeting. At the end of the course, you will publish a primarily research article in JEMI or if your paper is really good, JEMI+. 
  • Grading Scheme: Multiple schemes depending which gives you higher grade (depends on primarily lab notebook, midterm, project proposal, lab report)
  • Textbook: Optional Lab Book $10 (also posted online for free)
  • Class Average: 86%
  • Personal Experience: You learn a lot from this course from experimental design, lab techniques, to working in a team. Pick a group you work well with not necessarily your friends. Even the simplest project will often take triple the amount of time expected, so perhaps consider a less ambitious project. Do not trust any reagent you did not personally make yourself! Remember that this is a course, and mistakes will happen but that is how everyone learns. If possible, do not take directed studies with this lab course since this course will take A LOT of outside time. A rough estimate will be 16 hours per week for each team, and possibly more at the end of term. When deciding a project, it might be easier if your project did not ask a question where the experiment either worked or did not. 
Answers from readers' questions: 
  • Choose a good group to work with. I think groups work best if people have different lab experiences and strengths (ie. organization skills, writing, experimental techniques, troubleshooting). Also, ensure that everyone has time to come into the lab outside of the course time.
  • When you choose/ design a project, choose a project where at no point it hinges on a “yes/ no” answer. For example, what are the effects of caffeine vs does caffeine do this? Cause when it comes to writing up, it is easier to talk about the broader question than a yes/no question. If you can work on multiple parts of the project at the same time, it will save you time. For example, optimizing both protocol A and B at the same time before combining the two for your proper experiment. You can see the projects people did in previous years here: https://www.microbiology.ubc.ca/undergraduate/jemi
  • Read as much as possible before you dive into your project. The more pre-planning you do, the less troubleshooting you’ll probably run into.  

Thursday, 10 September 2015

How do I ____ ?

How do I send from my UBC alumni account if I chose to forward my email? 

For Gmail, go to "Settings" --> "Accounts & Imports" --> "Send mail as" --> Add another email address you own.
  • Email: UBC alumni account 
  • Server: smtp.gmail.com 
  • Port: 465 (choose SSL) 
  • Username: yourgmail@gmail.com 
  • Password: (your gmail password)

Sunday, 16 August 2015

Tolerance: the Future of Transplantation

“Live life, pass it on” reads an advertisement designed to increase potential organ donors. With more than 1,000 transplant waiting list patients dying per year in the UK, organ availability and transplant success rates are key to serve a constantly increasing demand for organ transplants.
Transplant centres across the world require more donors.
Photo from Geralt
Though transplantation was first explored in 1902, it was not until 1954 that the first successful human kidney transplant operation was performed. 50 years down the road, transplantation is considered the best possible treatment for most individuals with organ failure. Patients with severe kidney failure often prefer a single transplant procedure to a four-hour dialysis treatment three times a week. In addition, over a period of ten years, each successful kidney transplant patient saves the NHS (UK’s National Health Services) £24,100 ($49,355 CDN) per year compared to dialysis treatment. 
A successful kidney transplant saves $49,355 CDN per year compared to dialysis
However, transplantation has numerous challenges including organ rejection, infections, and cost. Organ rejection is when the body’s immune system recognizes the donated organ as “foreign” and attacks it. If the donated organ is continuously attacked, the organ becomes non-functional. There are three categories of rejection based on when the rejection occurs: hyperacute (within first few hours after transplant), acute (within first year after transplant), and chronic (a year or more after transplant). These organ rejection categories are believed to be initiated by different aspects of the immune system such as the recipient’s antibodies (proteins that recognize foreign objects) or white blood cells.

Organ rejection is one of the biggest risks of transplantation
Photo from http://spacesick.blogspot.ca/2009/07/organ-rejection-shirt.html
In order to minimize the potential for rejection and increase transplant success, multiple protective measures are taken. First, the donor must meet certain physical requirements. However, as deceased donors are becoming older, more obese, and less likely to have suffered trauma-related death (ie. died from organ failure), fewer organs are considered suitable for donation. In addition, the patient and the donor must be a closely matched by three immune components; the patient cannot have antibodies that recognize the donor’s cells, and the patient’s blood and human leukocyte antigen (HLA) type must be compatible with the donor. As a result, even though organs are in high demand, 12% of suitable organs are not transplanted due to a lack of compatible patients. Despite these protective measures, the recipient’s immune system may still recognize the donated organ as foreign and reject it. As a result, we have to resort to non-specific immunosuppressants. This poses a problem as this also suppresses other essential immune system functions, and causes the patient to be extremely susceptible to infections.

Immunosuppressants have improved acute organ rejection rates, but not chronic rejection rates
Photo from Stevepb
Thanks to recent improvements in immunosuppressive drugs, immunosuppressants have decreased acute organ rejection rates, but chronic rejection still remains a significant problem. For example, 93% - 97% of donated adult kidneys are still functioning well a year after surgery, but this drops to below 75% after ten years.  Not only do immunosuppressants become less effective at decreasing the risk of organ rejection over time, but chronic use of immunosuppressants has many challenges including patients’ reluctance to continue taking drugs, risk of infection, and long-term monetary cost (around £5,000 per year for each patient).
93%-97% of patients survive one year following kidney transplantation
~75% of patients survive ten years following kidney transplantation
Rather than improving current immunosuppressive drugs that repress the entire immune system, a major goal of transplantation research is to tailor the immune response to accept the newly transplanted organ by persuading the immune system to tolerate donor organs while still retaining its ability to respond to other disease-causing agents. The ability to induce tolerance would counteract the risk of acute and chronic rejection while eliminating the need for lifelong immunosuppressive therapy.
Tolerance is a major goal of transplantation research
Photo from DasWortgewand
A potential avenue for inducing tolerance is through “mixed chimerism”, where the host and donor bone-marrow-derived elements co-exist in the recipient. Mixed chimerism is effective in transplantation because donor blood cells can migrate to the host thymus and “teach” new T cells, a type of white blood cell, to ignore the donated organ without using immunosuppressants. This ensures the new T cells generated in the host are tolerant of elements from both the host and donor. An additional benefit of mixed chimerism is that severe depletion of patient’s bone marrow cells is not required unlike traditional transplantation techniques. This is extremely advantageous because in retaining some of their own own bone marrow cells, the recipient still has aspects of a working immune system as a backup system in case the donor organ is rejected.

Mixed chimerism could be an effective because it "teaches" new white blood cells called T cells.
Photo from Geralt
One major barrier that we still have to overcome is graft-vs-host disease (GVHD). GVHD is when the donor’s T cells from the donor’s transplant migrate into the recipient’s tissues and attack the “foreign” recipient’s body by recognizing HLA, which is contrary to organ rejection that is initiated by the host’s immune system. It is typically associated with stem cell or bone marrow transplant, but can also occur in some organ transplants. GVHD can lead to acute or chronic and include symptoms such as skin rash, muscle weakness, and selective damage to the liver and gastrointestinal tract. Since transplants often occur without perfectly matching HLA, balancing inducing tolerance via mixed chimerism while avoiding GVHD remains a challenge.

Lung transplant rejection with H&E stain
In general, most tolerance-inducing methods have been based on blocking an essential aspect of white blood cell activation known as co-stimulation. Co-stimulation ensures white blood cells can become fully functional and replicate properly. Blocking this co-stimulation essentially dampens the immune system and allows mixed chimerism to occur. In animals, antibodies that target a particular co-stimulatory pathway have been shown to allow mixed chimerism through reducing the immune inflammatory response. However, translating this process into humans has been challenging due to complications with blood clotting.
Xenotransplantation (using animal organs for transplantation) could become a possibility with mixed chimerism tolerance induction.
Photo from Netalloy 

Overall, major leaps have been made in making mixed chimerism tolerance induction safer and less toxic, so we can expand its use in transplantation and beyond. In fact, if we are able to induce tolerance, the possibility of xenotransplantation—using animal organs for transplantation—would become a possibility. Despite the fact that closely-related species are  better matched immunologically, the US Department of Health and Human Services declared a moratorium on primate-to-human transplantation in 1999 due to the potential risk of virus transmission. Today, xenotransplantation is focused on pigs because of their organ size and physiologic similarity to humans, and favourable breeding characteristics. Early research in xenotransplantation focused on monkeys due to their similarity with humans. While pigs can be slightly genetically modified to be more “human-like”, tolerance induction remains a critical keystone to future xenotransplantation applications and the key to solving our organ shortage dilemma.

References: 

Tuesday, 2 June 2015

Popular Elective Courses for First Years


What are electives? 
  • Electives are simply courses that are not explicitly stated in your degree program. They can be courses related to your field or courses in a different faculty. Some students prefer taking "easy" electives while some students choose harder ones. 
What are popular electives for Science students (with little/no pre-reqs)? Useful = red

Arts
  • CLST 301: The Technical Terms of Medicine and Biological Science
  • ECON 101/102: Micro & Macro Economics
  • ENGL 110: Approaches to Literature
  • ENGL 112: Strategies for University Writing
  • MUSC 103: Intro to Music Theory
  • MUSC 119: Intro to Music Technology
  • MUSC 326A: Music Appreciation
  • PHIL 120: Introduction to Critical Thinking (cannot take if you have 90+ credits)
  • PHIL 125: Introduction to Scientific Reasoning
  • PHIL 220: Symbolic Logic I
  • PHIL 433A: Bio-Medical Ethics
  • PHIL 435A: Environmental Ethics
  • PHIL 460A: Philosophy of Science
  • PHIL 464: Philosophy of Biology
  • PSYC 101/102: Intro to Biological & Cognitive Psych + Developmental, Social, Personality, and Clinical Psychology
Science
  • BIOL 300: Fundamentals of Biostatistics
  • CPSC 110: Computation, Programs, and Programming
  • EOSC 110: The Solid Earth: A Dynamic Planet
  • EOSC 114: The Catastrophic Earth: Natural Disasters
  • STAT 200: Elementary Statistics for Applications